genomic database interfaces

This topic is: genomic database interfaces

Nanotech and Biotech Investing and Stocks, and genomic database interfaces

Thanks for visiting our Biotech Investing (along with nanotech and nanotechnology investing) directory. Here are resources for genomic database interfaces

WWW'95: Integrated Genomic Database using WWW
... Integrated Genomic Database using WWW. Martin Senger, DKFZ Heidelberg m.senger@dkfz-heidelberg ... The IGD server (IGD-TED) has two query interfaces: for specific database clients (IGD ...
http://www.igd.fhg.de/archive/1995_www95/proceedings/posters/18

A Distributed Collaboratory for High-Throughput Analysis and Annotation of Genomes
... for high-quality analysis and annotation of large amounts of genomic sequence data ... genome centers and from public database interfaces for purposes of generating analysis ...
http://www.nersc.gov/cbcg/DistAnnGine96/DistAnnGine.proposal.html

Achieving Interoperability of Genome Databases through Intelligent Web Mediators
... application program interfaces; user interfaces; genome database interoperability; intelligent Web ... resolution; SQL3-compliant database query language; Genomic Query Language; GQL ...
http://csdl.computer.org/comp/proceedings/bibe/2000/0862/00/08620118abs.htm

Stanford DNA Sequencing & Technology Center
... genomic computational toolkit including a generic functional genomic database and server-side analysis applications ... Shiang-Ling Cheng (some database and web interfaces development) ...
http://cycle.stanford.edu/group/informatics

Bioinformatics Paper: JESAM: CORBA software components for EST alignments and clusters
... to obtain relative to full genomic sequencing and currently sample more ... built as alignment database clients are themselves published via CORBA interfaces browsable with prototypical ...
http://corba.ebi.ac.uk/EST/jesam/jesam_paper.html

Search Results in the Bio Netbook [database online analysis tools biochemistry sequence analysis structural biology]
L'Institut Pasteur est un centre de recherche en biologie. ... http://genomic.sanger ... interfaces/abiview.html. AceDB (3.1) - metabolic pathways. AceDB (3.1) - metabolic pathways. classification: database, Caenorhabditis elegans, biochemistry, genomic ...
http://www.pasteur.fr/cgi-bin/biology/bnb_s.pl?bool=et&english=1&rsc=database&rsc=online+analysis+tools&bio=biochemistry&bio=sequence+analysis&bio=structural+biology

www.omg.org/issues/issue4495.txt
Issue 4495: Request for Conformance Points (genomic_map-ftf) Source: GlaxoSmithKline plc (Dr. W. ... maps in the underlying map database could be preprocessed to integrate ... to the Genomic Maps Specification: (1) Base Maps. Implements all modules and interfaces described in Chapter ...
http://www.omg.org/issues/issue4495.txt

A Multi-Agent Architecture for the Integration of Genomic Information (ResearchIndex)
This paper a framework architecture for the intelligent integration of genomic and other information. The goal of the system is to hide the large variety of local or remote IRs and the disparity ... of local or remote IRs and the disparity of their interfaces. A user agent (human or another system ... 3 The Integrated Genomic Database (context) - Ritter. 2 Restructuring the Genome ...
http://citeseer.nj.nec.com/84236.html

Computational Proxies for Genomic Databases
... Computational Proxies for Genomic Databases. Judith Bayard Cushing ... in the Trees", Committee for a pilot study on database interfaces", National Academy Press, Washington, DC, 1995 ...
http://www.cs.pitt.edu/idm98/Imported/judyc.html

Multiple Database Personalities: Facilitating Access to Research Data
File type:PDF - Download PDF Reader
... scientifically-oriented Web-to-database tool, to create. database interfaces for two audiences ... impractical to merge all genomic data into a single ...
marknewsome.tripod.com/work/pubs/SCI98.pdf
More pages from marknewsome.tripod.com

Going back to our Database Roots for Managing Genomic Data
... Going Back to our Database Roots for Managing Genomic Data ... of current query languages and proprietary user interfaces, the different formats and the lack of structure ...
http://marknewsome.tripod.com/work/pubs/SCI98.pdf

Genomics Algebra: A New, Integrating Data Model, Language, and Tool for Processing and Querying Genomic Information
File type:PDF - Download PDF Reader
... deliberately avoided the term genomic database and replaced it by the term genomic ... Multitude of user interfaces (B7). The multitude of genomic repositories implies a ...
www-db.cs.wisc.edu/cidr/program/p16.pdf
More pages from www-db.cs.wisc.edu

Search Results in the Bio Netbook [online analysis tools ]
L'Institut Pasteur est un centre de recherche en biologie. ... of Pathway/Genome Databases. classification: database, online analysis tools, genomic, biochemistry, bio-computing ... http://bioweb.pasteur.fr/seqanal/interfaces/bionj-simple.html ...
http://www-db.cs.wisc.edu/cidr/program/p16.pdf

Other Genomic Databases
Other Genomic Databases. There are many. genomic databases for the several organisms we study. A few organisms, like humans and yeast, have quite a few more than one! ... the number of databases, and the variety of interfaces to them, poses an overwhelming burden of learning on ... if YOUR favourite genomic database isn't here, PLEASEtell me about it ...
http://biobase.dk/Embnetut/Gdb5omim/g5opt7.html

Mouse Hunt - Archive
... Brain Library may be a shortcut out of the maze of genomic database standards. Read More ... understand the query interfaces of each individual database, or even necessarily knowing ...
http://rdre1.yahoo.com/click?u=http://www.bio-itworld.com/archive/061503/mouse.html&y=027A84C2FFE02157&i=487&c=8273&q=02%5ESSHPM%5BL7xzqprv%7C%3F%7B~k~%7D~lz%3Fvqkzmy~%7Czl6&e=utf-8&r=9&d=nrm-en-us&n=EB5K5H576E640274&s=0&t=&m=408C47A1&x=014DC103816929B8

GDB OMIM Part VII
Other Genomic Databases. There are many. genomic databases for the several organisms we study. A few organisms, like humans and fruitflies, have quite a few more than one! ... the number of databases, and the variety of interfaces to them, poses an overwhelming burden of learning on ... if YOUR favourite genomic database isn't here, PLEASE tell me about it ...
http://www.hgmp.mrc.ac.uk/dfeather/Gdbomim5/GDB_OMIM_Part_VII.html

Split Personalities for Scientific Databases:
File type:PDF - Download PDF Reader
Split Personalities for Scientific Databases:Targeting Database Middleware and Interfaces to Specific AudiencesCherri M. Pancake1, Mark Newsome1, and F. Joe Hanus2Dept. of Computer Science1, Dept. ... impractical to merge all. genomic data into a single, consistent repository; they ...
www.cs.orst.edu/~pancake/papers/SplitPers.pdf
More pages from cs.orst.edu

Genomic Software
Genomics Software offered by the BCF. Software for Windows and Macintosh computers: DNAStar LaserGene - for installation help go here. Vector NTI - for installation help and site licensing go here. Oligo - for installation help go here. ... use nucleotide nr database to search for genomic sequences not in human_genomic or other_genomic divisions ...
http://www.cs.orst.edu/~pancake/papers/SplitPers.pdf

Nucl. Acids. Res. -- Nikaido et al. 32 (Supplement 1): D548
... interfaces: the SNP-centralview (MuSCAT: MoUse SNP CATalog) and the candidate gene-centralview (CITE: Candidate Imprinted Transcripts by Expression).The database ... Genomic imprinting results ...
http://nar.oupjournals.org/cgi/content/full/32/suppl_1/D548

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